miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|50566112|gb|CO644618.1|CO644618 TTGGGAAAACATTGGAATCCAATTTATTTGATGATAACATTGATATCTTTGCTGACTTAACTGTAAAACCAAAAGAAAAG
TCCAAAAAGAAAGTGGAAGCCAAGTCTATATTTGATGATGATATGGATGACATCTTCTCCTCTGGTATCCAGGCTAAGAC
AACCAAACCAAAAAGTCGATCTGCACAAGCCGCACCTGAACCAAGATCGGAACACGAGGTGTCCAACATCTTTGATGATC
CCCTGAATGCCTTTGGAGGCCAGTAGAGCATACAGGGTATCCACATGTTATCCTGCAGCTACACTGTTGAGTTAGTGATG
ATGTTGTATACGCTTATGGTCTTAACTGGGTTACAAAAAGCAAGTATTAGAAGAGCTAGCTCATCTTTTACCCAATGTAC
TTAGTATTTTTCTGCACTGGTTTAATCACGCTTAATACTACAAAACAAAAATAAGTATTTCACAGTGGTTGGTTGGTTTT
GTTTTTAAAGCATAGTTTGGTTTAGTTAGCCTTGCTGGGGCCATAATATGCTTCAGGATGTGTAAAAGAAGCAATCTCCT
TGTGGCTTTCATGGGTAGTCAGGGAATCTCAGAGATAGCAAATGCCACATGACCAGGAGTCTTTGTTATATGGATGGGAA
CCCTAACTTAGGGCCTGGGCAGGTGAAAGAGAAAGAAGGTGAGAGATTATACTCCACGAGTCTTAGCAATATGGGAGCAG
GTTTTCACTGAATTCTGAAGGTGCCTCTGCATGTCCTCCAAGGCAGGGTTTGACAAACTATGGCCCCCCACTGTCGTATT
TTTGTAATAAAATTTTATTGGAACCCAAAAAAAAAAAAAAAAAAAAAACCCACTTTTCTTGGAAAAAGTTGGTATTTAAA
AAAAACTTTGCTTAACCATTTGTTTGCACAAAACAGGGCCCCCAACCA




Most similar to sp|Q5SRD0|FA21D_HUMAN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q5SRD0|FA21D_HUMAN Putative WASH complex subunit FAM21 OS=Homo
           sapiens GN=FAM21D PE=3 SV=2
          Length = 308

 Score =  107 bits (266), Expect = 2e-22
 Identities = 57/86 (66%), Positives = 58/86 (67%)
 Frame = +3

Query: 6   KTLESNLFDDNIDIFADLTXXXXXXXXXXXXXXXXXXXXXXXXXXXGIQAKTTKPKSRSA 185
           KTLESNLFDDNIDIFADLT                           GIQAKTTKPKSRSA
Sbjct: 223 KTLESNLFDDNIDIFADLTVKPKEKSKKKVEAKSIFDDDMDDIFSTGIQAKTTKPKSRSA 282

Query: 186 QAAPEPRSEHEVSNIFDDPLNAFGGQ 263
           QAAPEPR EH+VSNIFDDPLNAFGGQ
Sbjct: 283 QAAPEPRFEHKVSNIFDDPLNAFGGQ 308